STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_11900Lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (333 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.907
ORS3428_05130
Aminotransferase.
     
 0.894
ORS3428_09465
Aspartate aminotransferase.
     
 0.871
ORS3428_13790
Aminotransferase.
     
 0.871
ORS3428_19565
Malic enzyme.
    
 0.845
ORS3428_20040
Malic enzyme.
    
 0.845
ORS3428_17375
Peptidase.
  
    0.787
ORS3428_28365
Peptidase M19.
  
    0.787
ORS3428_20705
Aminotransferase.
     
 0.747
ORS3428_23220
Aminotransferase.
     
 0.747
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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