STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_19795LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ORS3428_19820
Formate dehydrogenase.
 
     0.841
ORS3428_19810
Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.790
fdhD
Sulfur carrier protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.767
ORS3428_19800
Formate dehydrogenase subunit gamma.
 
     0.665
ORS3428_19805
Formate dehydrogenase.
 
     0.659
ORS3428_19790
Glyoxalase.
       0.533
ORS3428_18215
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.457
ORS3428_15570
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.435
ORS3428_07210
HTH lysR-type domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
     0.434
ORS3428_13660
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.424
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.