STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_200052-methylisocitrate lyase. (267 aa)    
Predicted Functional Partners:
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
 0.856
ORS3428_29330
Uncharacterized protein.
   
 0.856
ORS3428_29850
annotation not available
   
 0.856
ORS3428_30205
annotation not available
   
 0.856
ORS3428_23310
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.812
ORS3428_28630
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 0.812
ORS3428_05625
Citrate synthase; Belongs to the citrate synthase family.
  
 0.784
ORS3428_12790
Citrate synthase/methylcitrate synthase; Belongs to the citrate synthase family.
  
 0.784
ORS3428_12795
Citrate synthase.
  
 0.784
ORS3428_20010
Proline racemase; Belongs to the proline racemase family.
       0.773
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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