STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_22250Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (336 aa)    
Predicted Functional Partners:
ORS3428_22260
Amino acid ABC transporter permease.
 
  0.911
ORS3428_22255
ABC transmembrane type-1 domain-containing protein.
 
 
  0.898
ORS3428_14750
Amino acid ABC transporter permease.
  
  0.839
ORS3428_26470
Amino acid ABC transporter permease.
  
  0.839
ORS3428_23350
Amino acid ABC transporter permease.
  
  0.821
ORS3428_20670
ABC transporter permease.
  
  0.819
ORS3428_23180
ABC transporter permease.
  
  0.818
ORS3428_14755
Amino acid ABC transporter permease.
  
 
  0.812
ORS3428_26465
Amino acid ABC transporter permease.
  
 
  0.812
ORS3428_20665
ABC transporter permease.
  
 
  0.809
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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