STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORS3428_26955Amino acid ABC transporter substrate-binding protein. (264 aa)    
Predicted Functional Partners:
ORS3428_26960
ABC transporter permease.
  0.939
ORS3428_16335
Amino acid ABC transporter.
 
  0.926
ORS3428_26965
ABC transporter permease.
 
  0.917
ORS3428_19700
ABC transporter permease.
 
  0.908
ORS3428_26950
Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein.
 
 
  0.907
ORS3428_05425
Amino acid ABC transporter permease.
 
  0.902
ORS3428_12840
Cysteine ABC transporter permease.
 
  0.881
ORS3428_20455
ABC transporter permease.
 
  0.879
ORS3428_09985
Ectoine/hydroxyectoine ABC transporter permease subunit EhuC.
 
  0.870
ORS3428_10325
Ectoine/hydroxyectoine ABC transporter permease subunit EhuC.
 
  0.868
Your Current Organism:
Mesorhizobium sp. ORS3428
NCBI taxonomy Id: 540997
Other names: M. sp. ORS 3428, Mesorhizobium sp. ORS 3428
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