Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ORS3428_00640 | ORS3428_01840 | Glycine cleavage system protein T; Belongs to the GcvT family. | FAD-dependent oxidoreductase; Belongs to the GcvT family. | 0.899 |
ORS3428_00640 | ORS3428_01880 | Glycine cleavage system protein T; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.978 |
ORS3428_00640 | ORS3428_03645 | Glycine cleavage system protein T; Belongs to the GcvT family. | Aminopeptidase. | 0.669 |
ORS3428_00640 | ORS3428_09115 | Glycine cleavage system protein T; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.982 |
ORS3428_00640 | ORS3428_10355 | Glycine cleavage system protein T; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.978 |
ORS3428_00640 | ORS3428_15320 | Glycine cleavage system protein T; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.978 |
ORS3428_00640 | ORS3428_26865 | Glycine cleavage system protein T; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.978 |
ORS3428_00640 | ORS3428_29625 | Glycine cleavage system protein T; Belongs to the GcvT family. | Uncharacterized protein. | 0.567 |
ORS3428_00640 | ORS3428_30220 | Glycine cleavage system protein T; Belongs to the GcvT family. | Uncharacterized protein; Belongs to the GcvT family. | 0.980 |
ORS3428_01840 | ORS3428_00640 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Glycine cleavage system protein T; Belongs to the GcvT family. | 0.899 |
ORS3428_01840 | ORS3428_01880 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.977 |
ORS3428_01840 | ORS3428_03645 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Aminopeptidase. | 0.622 |
ORS3428_01840 | ORS3428_09115 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.977 |
ORS3428_01840 | ORS3428_10355 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.977 |
ORS3428_01840 | ORS3428_15320 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.977 |
ORS3428_01840 | ORS3428_26865 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.977 |
ORS3428_01840 | ORS3428_29625 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Uncharacterized protein. | 0.567 |
ORS3428_01840 | ORS3428_30220 | FAD-dependent oxidoreductase; Belongs to the GcvT family. | Uncharacterized protein; Belongs to the GcvT family. | 0.980 |
ORS3428_01880 | ORS3428_00640 | Sarcosine oxidase subunit alpha. | Glycine cleavage system protein T; Belongs to the GcvT family. | 0.978 |
ORS3428_01880 | ORS3428_01840 | Sarcosine oxidase subunit alpha. | FAD-dependent oxidoreductase; Belongs to the GcvT family. | 0.977 |
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