STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES66086.1Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (243 aa)    
Predicted Functional Partners:
SES67219.1
uroporphyrinogen-III synthase.
 
 0.998
SET43795.1
Uroporphyrinogen III methyltransferase / synthase.
 
 0.998
SES66751.1
Precorrin-4 C11-methyltransferase.
  
 0.951
SET43672.1
CbiX protein.
  
 
 0.892
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.834
SES66733.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
    
 0.780
SES66106.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
     
 0.778
SET77464.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.769
SET77669.1
Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.738
SET44133.1
DNA-binding transcriptional regulator, Lrp family.
 
  
  0.648
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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