STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES83747.1Iron complex transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
SES83721.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
SET78491.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.987
SES83699.1
Iron complex transport system substrate-binding protein.
 
 0.983
SES84985.1
Iron complex transport system substrate-binding protein.
 
 0.937
SES83676.1
Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
 
     0.747
SES83772.1
PAS fold-containing protein.
       0.490
SET04887.1
Formylmethanofuran dehydrogenase subunit E.
 
    0.457
SES83652.1
Hypothetical protein.
       0.454
SES83147.1
Zinc transport system permease protein.
    
 0.441
cobD
Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
    
 0.425
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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