STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES82158.1Transposase DDE domain-containing protein. (208 aa)    
Predicted Functional Partners:
SES82180.1
Hypothetical protein.
     0.989
SET03593.1
Methyltransferase domain-containing protein.
 
  
 0.706
SET48647.1
Hypothetical protein.
 
  
 0.669
SET03528.1
Hypothetical protein.
 
  
 0.668
SET03446.1
Putative inner membrane protein.
 
  
 0.658
SET03651.1
ATP-dependent Lon protease.
 
    0.633
SET48541.1
ATP-dependent Lon protease.
 
    0.630
SET03791.1
AAA domain (dynein-related subfamily).
   
    0.575
SET03384.1
Superfamily I DNA and/or RNA helicase.
  
    0.557
SET66333.1
Type II secretory pathway, component ExeA (predicted ATPase).
  
     0.555
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.