STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET03384.1Superfamily I DNA and/or RNA helicase. (1586 aa)    
Predicted Functional Partners:
SET03593.1
Methyltransferase domain-containing protein.
  
    0.862
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.856
SET03791.1
AAA domain (dynein-related subfamily).
 
    0.826
SET03528.1
Hypothetical protein.
  
    0.778
SET03651.1
ATP-dependent Lon protease.
  
    0.755
SET03360.1
Protein of unknown function.
  
    0.708
SET03402.1
Hypothetical protein.
       0.705
SET48647.1
Hypothetical protein.
 
    0.696
SET28738.1
Glutamate synthase (ferredoxin).
  
    0.693
SET03508.1
Protein of unknown function.
  
    0.671
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.