STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET09241.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (166 aa)    
Predicted Functional Partners:
SET42813.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.591
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.565
SET12175.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.563
SET19942.1
Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.558
SES75110.1
DNA-binding transcriptional regulator, IclR family.
    
  0.550
SET19538.1
Sulfide dehydrogenase (flavoprotein) subunit SudB.
 
 
  0.540
pyrD
Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
 
  0.536
SES85867.1
Undecaprenyl-diphosphatase.
    
 0.535
SET19970.1
Pyrimidine-nucleoside phosphorylase.
    
  0.533
SET38485.1
Dihydroorotate oxidase B, electron transfer subunit.
 
 
  0.524
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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