STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET75517.1Transposase. (388 aa)    
Predicted Functional Partners:
SET58777.1
Transposase domain.
  
    0.748
SES68771.1
Conserved repeat domain-containing protein.
  
     0.746
SET06726.1
Transposase (or an inactivated derivative).
  
     0.744
SET61638.1
Transposase (or an inactivated derivative).
  
     0.744
SET72101.1
Transposase (or an inactivated derivative).
  
     0.744
SET76176.1
Transposase (or an inactivated derivative).
  
     0.744
SES73680.1
SEC-C motif-containing protein.
  
     0.707
SET25958.1
Hypothetical protein.
  
     0.699
SET56116.1
HIRAN domain-containing protein.
  
     0.694
SES65163.1
Hypothetical protein.
  
     0.663
Your Current Organism:
Halanaerobium congolense
NCBI taxonomy Id: 54121
Other names: DSM 11287, H. congolense, Haloanaerobium congolense, SEBR 4224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.