STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00274572Uncharacterized protein. (274 aa)    
Predicted Functional Partners:
WBGene00112519
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.827
WBGene00093558
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.826
WBGene00102337
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.824
WBGene00276093
PFK domain-containing protein.
  
 0.822
WBGene00108378
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.822
WBGene00275305
Fbp-1; Belongs to the FBPase class 1 family.
   
 
 0.819
WBGene00090652
Phosphoserine aminotransferase.
    
 0.810
WBGene00098434
Tkt-1.
    
 0.810
WBGene00096341
Enol-1.
    
 0.808
WBGene00274534
Suf-1.
    
 0.807
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.