STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00276938Wht-2. (680 aa)    
Predicted Functional Partners:
WBGene00108124
Abch-1.
   
0.928
WBGene00107948
Cox-15.
    
 0.785
WBGene00093646
Protein-serine/threonine kinase.
  
 
 0.775
WBGene00109085
Aamy domain-containing protein.
   
 
  0.752
WBGene00107222
Mrp-4.
  
 0.747
WBGene00104604
Ppfr-4.
    
 0.745
WBGene00274010
FAD dependent oxidoreductase.
  
 
 0.690
WBGene00108552
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
    
 0.686
WBGene00274579
ABC transporter ATP-binding protein.
  
 0.681
WBGene00280291
ABC transporter ATP-binding protein.
  
 0.681
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.