Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00277953Sem-2. (445 aa)    
Predicted Functional Partners:
WBGene00094532
Blmp-1.
   
 0.896
WBGene00278626
Pop-1.
    
 0.840
WBGene00099291
POP-1.
    
 0.840
WBGene00111229
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.785
WBGene00275329
Hmp-2.
    
 0.780
WBGene00118218
Bar-1.
    
 0.780
WBGene00090604
Serine/threonine-protein phosphatase; Belongs to the POU transcription factor family.
    
 0.765
WBGene00277036
Uncharacterized protein.
    
 0.760
WBGene00111239
Gyg-2.
    
   0.759
WBGene00276837
POU domain protein.
    
 0.742
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.