STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00278336Fkh-8. (308 aa)    
Predicted Functional Partners:
WBGene00102744
Cya-1; Belongs to the cyclin family.
   
 0.953
WBGene00100946
Non-specific serine/threonine protein kinase.
   
 0.944
WBGene00276965
Sep-1.
   
  
 0.918
WBGene00101296
Serine/threonine-protein kinase PLK.
   
 0.909
WBGene00096549
Cdk-4; Belongs to the protein kinase superfamily.
   
 0.903
WBGene00106759
Cdk-1; Belongs to the protein kinase superfamily.
   
 0.903
WBGene00098714
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.882
WBGene00096249
Protein kinase domain-containing protein.
   
 0.881
WBGene00106110
Pct-1.
   
 0.881
WBGene00277127
Lin-54.
    
 0.880
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.