STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00278600Phosphotransferase. (454 aa)    
Predicted Functional Partners:
WBGene00273816
Mrpl-20.
  
 
 0.962
WBGene00106897
Mrps-9.
  
 
 0.962
WBGene00103907
Mrpl-17.
  
 
 0.961
WBGene00277091
Rps-18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.960
WBGene00281596
Mrpl-32.
  
 
 0.960
WBGene00112416
Mrpl-9.
   
 
 0.960
WBGene00113324
Large subunit ribosomal protein 16; Rpl-16.
  
 
 0.960
WBGene00099830
MSP domain-containing protein; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.957
WBGene00112399
Mrpl-21.
  
 
 0.955
WBGene00276043
Mrpl-36.
  
 
 0.953
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.