STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00280471L51_S25_CI-B8 domain-containing protein. (96 aa)    
Predicted Functional Partners:
WBGene00203480
Cyc-1.
   
 0.999
WBGene00206177
Uncharacterized protein.
   
 0.999
WBGene00274084
Nuo-2; Belongs to the complex I 30 kDa subunit family.
   
 0.999
WBGene00275440
Uncharacterized protein.
   
 0.999
WBGene00277085
Uncharacterized protein.
   
 0.999
WBGene00278534
KH_dom_type_1 domain-containing protein.
   
 0.999
WBGene00281607
Uncharacterized protein.
   
 0.999
WBGene00097330
Uncharacterized protein.
   
 0.999
WBGene00103894
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.999
WBGene00104131
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.999
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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