STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00091733Tyrosine phosphatase. (422 aa)    
Predicted Functional Partners:
WBGene00100637
Sem-5.
   
 0.753
WBGene00090749
Receptor protein-tyrosine kinase.
    
 0.741
WBGene00110006
Fibronectin domain-containing protein.
   
 0.741
WBGene00105968
Signal transducer and activator of transcription.
    
 0.740
WBGene00278866
Serpentine receptor class gamma; Belongs to the nematode receptor-like protein srg family.
    
 0.723
WBGene00206156
Fibrinogen C-terminal domain-containing protein.
    
 0.719
WBGene00280153
C-type lectin.
    
 0.719
WBGene00117228
Aap-1.
    
 0.703
WBGene00272466
Uncharacterized protein.
    
 0.697
WBGene00275856
SH2 domain-containing protein.
    
 0.697
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.