STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00091782Cogc-2. (1384 aa)    
Predicted Functional Partners:
WBGene00101514
Cogc-3.
   
 0.999
WBGene00104492
Cogc-1.
   
 0.998
WBGene00114528
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.998
WBGene00106177
Cogc-8.
    
 0.997
WBGene00278594
Uncharacterized protein.
   
 0.990
WBGene00113498
Cogc-4.
   
 0.990
WBGene00117398
Vps-51.
   
 
 0.898
WBGene00095958
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.893
WBGene00274995
Syx-16.
     
 0.890
WBGene00091736
Nbet-1.
     
 0.889
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.