STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00092315Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
WBGene00281607
Uncharacterized protein.
  
 
 0.998
WBGene00092872
Collagen.
   
 0.998
WBGene00274084
Nuo-2; Belongs to the complex I 30 kDa subunit family.
  
 
 0.995
WBGene00278281
Uncharacterized protein.
  
 0.993
WBGene00103894
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.988
WBGene00205847
NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450.
   
 0.985
WBGene00281885
Fre-1.
   
 0.985
WBGene00108143
Mtrr-1.
   
 0.985
WBGene00272377
NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.979
WBGene00107003
Nuo-1.
  
 
 0.977
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.