STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00098871Gpa-7 protein. (364 aa)    
Predicted Functional Partners:
WBGene00097691
Egl-30.
  
0.912
WBGene00100651
Gpb-2 protein.
   
 0.898
WBGene00114710
Slc-28.1.
   
 0.898
WBGene00280602
ADP ribosylation factor.
  
  
 
0.890
WBGene00089635
Ags-3.
   
 0.887
WBGene00112868
Egl-10.
   
 0.879
WBGene00278045
Npr-14; Belongs to the G-protein coupled receptor 1 family.
   
 0.872
WBGene00091523
Rgs-3.
   
 0.868
WBGene00118572
Gar-3; Belongs to the G-protein coupled receptor 1 family.
    
 0.850
WBGene00089852
Rgs-2.
   
 0.847
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.