STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00113316Uncharacterized protein. (421 aa)    
Predicted Functional Partners:
WBGene00276183
Ptd-2.
    
 0.831
WBGene00098091
Che-14.
    
 0.831
WBGene00272395
Ptc-1.
   
 0.782
WBGene00277225
Ptc-3.
   
 0.782
WBGene00280802
Uncharacterized protein.
   
 0.782
WBGene00283746
Uncharacterized protein.
   
 0.782
WBGene00096974
Uncharacterized protein.
   
 0.782
WBGene00113065
Apl-1.
    
 0.777
WBGene00116868
Gpn-1; Belongs to the glypican family.
    
 0.742
WBGene00284429
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
    
 0.667
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.