STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00114300Epg-3. (429 aa)    
Predicted Functional Partners:
WBGene00278108
Atg-13.
     
 0.952
WBGene00096090
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. Belongs to the PI3/PI4-kinase family.
    
 
 0.599
WBGene00274712
Uncharacterized protein.
      
 0.573
WBGene00110527
Epg-5.
      
 0.573
WBGene00098283
Uncharacterized protein.
      
 0.554
WBGene00105568
Atg-2.
      
 0.554
WBGene00099450
Uncharacterized protein.
      
 0.553
WBGene00095956
Autophagy-related protein 3.
   
  
 0.540
WBGene00204309
Atg-7.
   
  
 0.539
WBGene00108435
WD40 domain-containing protein.
      
 0.539
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.