STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00115096Protein kinase domain-containing protein. (778 aa)    
Predicted Functional Partners:
WBGene00091221
Unc-89.
   
 0.932
WBGene00276327
Ankyrin repeat-containing protein.
  
 0.781
WBGene00109891
Alh-13.
   
 0.779
WBGene00104201
Hum-7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.772
WBGene00099947
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.767
WBGene00117102
Magi-1.
    
 0.766
WBGene00099860
Gpdh-2 protein.
    
 0.762
WBGene00089578
Lin-2; Belongs to the MAGUK family.
    
 0.757
WBGene00093706
Phosphotransferase.
  
 
 0.757
WBGene00113131
Ankyrin repeat-containing protein.
  
 0.756
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.