STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00116127Uncharacterized protein. (2138 aa)    
Predicted Functional Partners:
WBGene00099962
Alpha-galactosidase.
  
 
 0.859
WBGene00108596
Alpha-galactosidase.
   
 
 0.830
WBGene00108628
Bgal-1.
  
 
 0.751
WBGene00274988
NAAA-beta domain-containing protein.
   
 
 0.720
WBGene00101357
Uncharacterized protein.
   
 
 0.720
WBGene00272269
Uncharacterized protein.
    
 0.716
WBGene00281605
Afmd-1.
    
 0.716
WBGene00107284
Trcs-1.
    
 0.716
WBGene00109861
Hosl-1.
    
 0.716
WBGene00203226
Glycoside hydrolase.
    
 0.700
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.