STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBGene00117317Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
WBGene00109316
Pcp-5.
     
 0.603
WBGene00098131
App-1; Belongs to the peptidase M24B family.
    
 0.575
WBGene00105341
Angiotensin-converting enzyme.
     
 0.574
WBGene00111152
Peptidase.
     
 0.530
WBGene00090807
Uncharacterized protein.
    
 0.523
WBGene00095917
CUB domain-containing protein.
    
 0.523
WBGene00118114
Sol-1.
    
 0.523
WBGene00092039
Ina-1; Belongs to the integrin alpha chain family.
     
 0.477
WBGene00109467
Pat-2; Belongs to the integrin alpha chain family.
     
 0.477
Your Current Organism:
Pristionchus pacificus
NCBI taxonomy Id: 54126
Other names: P. pacificus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.