STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX77271.1Glycosyl transferase, group 2 family protein. (342 aa)    
Predicted Functional Partners:
tgtA
Archaeosine tRNA-ribosyltransferase type 1 / archaeosine tRNA-ribosyltransferase PUA domain; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
   
 
 0.769
CUX77860.1
Polysaccharide deacetylase.
  
  
 0.722
CUX76799.1
Hypothetical protein.
  
 
 0.572
CUX76880.1
FOG: TPR repeat.
  
 
 0.572
CUX77097.1
Hypothetical protein.
  
 
 0.572
CUX78105.1
Hypothetical protein.
  
 
 0.572
CUX78900.1
Hypothetical protein.
  
 
 0.572
CUX77305.1
Glycosyl transferase family 2.
 
  
 0.508
CUX78261.1
FIG003033: Helicase domain protein.
 
   
 0.496
CUX78071.1
Dolichol-phosphate mannosyltransferase in lipid-linked oligosaccharide synthesis cluster.
  
     0.495
Your Current Organism:
Thermococcus chitonophagus
NCBI taxonomy Id: 54262
Other names: DSM 10152, T. chitonophagus, strain GC74
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