STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX77848.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
CUX77849.1
UPF0251 protein CTC_01373; Belongs to the UPF0251 family.
 
     0.646
polC
Archaeal DNA polymerase II large subunit @ intein-containing; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase.
 
     0.598
CUX77850.1
Hypothetical protein.
       0.559
CUX77219.1
Queuosine biosynthesis QueD, PTPS-I.
       0.549
Your Current Organism:
Thermococcus chitonophagus
NCBI taxonomy Id: 54262
Other names: DSM 10152, T. chitonophagus, strain GC74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.