Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEA_004442RING-type domain-containing protein. (869 aa)    
Predicted Functional Partners:
TEA_003776
Uncharacterized protein.
    
 0.790
TEA_003774
Uncharacterized protein.
    
 0.790
TEA_002666
ANK_REP_REGION domain-containing protein.
    
  0.636
TEA_005014
Uncharacterized protein.
    
  0.636
TEA_029878
ANK_REP_REGION domain-containing protein.
    
 0.593
TEA_009259
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 
 0.585
TEA_020475
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.578
TEA_015587
Lzipper-MIP1 domain-containing protein.
   
 0.561
TEA_019754
Uncharacterized protein.
   
 0.525
TEA_013736
Uncharacterized protein.
     
  0.485
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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