TEA_004376 protein (Camellia sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TEA_004376

Uncharacterized protein. (894 aa)

Predicted Functional Partners:

TEA_024011

0.950

TEA_012444

0.911

TEA_012439

0.911

TEA_004685

0.894

TEA_005166

0.878

TEA_000261

0.878

TEA_001059

0.878

TEA_014397

0.878

TEA_007852

0.844

TEA_003372

0.820

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_000261	TEA_003372	A0A4S4EIS5	A0A4S4DC52	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.441
TEA_000261	TEA_004376	A0A4S4EIS5	A0A4S4CWS0	Aminotran_5 domain-containing protein.	Uncharacterized protein.	0.878
TEA_000261	TEA_004685	A0A4S4EIS5	A0A4S4F418	Aminotran_5 domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.887
TEA_000261	TEA_005166	A0A4S4EIS5	A0A4S4DUH7	Aminotran_5 domain-containing protein.	Aminotran_5 domain-containing protein.	0.878
TEA_000261	TEA_012439	A0A4S4EIS5	A0A4S4ERD3	Aminotran_5 domain-containing protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.994
TEA_000261	TEA_012444	A0A4S4EIS5	A0A4S4EPS1	Aminotran_5 domain-containing protein.	NifU_N domain-containing protein.	0.994
TEA_000261	TEA_014397	A0A4S4EIS5	A0A4V3WLF1	Aminotran_5 domain-containing protein.	Aminotran_5 domain-containing protein.	0.447
TEA_000261	TEA_024011	A0A4S4EIS5	A0A4S4EFA7	Aminotran_5 domain-containing protein.	J domain-containing protein.	0.899
TEA_001059	TEA_003372	A0A4S4EWQ7	A0A4S4DC52	F-box domain-containing protein.	Uncharacterized protein.	0.441
TEA_001059	TEA_004376	A0A4S4EWQ7	A0A4S4CWS0	F-box domain-containing protein.	Uncharacterized protein.	0.878
TEA_001059	TEA_004685	A0A4S4EWQ7	A0A4S4F418	F-box domain-containing protein.	Fe-S_biosyn domain-containing protein.	0.887
TEA_001059	TEA_012439	A0A4S4EWQ7	A0A4S4ERD3	F-box domain-containing protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.994
TEA_001059	TEA_012444	A0A4S4EWQ7	A0A4S4EPS1	F-box domain-containing protein.	NifU_N domain-containing protein.	0.994
TEA_001059	TEA_024011	A0A4S4EWQ7	A0A4S4EFA7	F-box domain-containing protein.	J domain-containing protein.	0.899
TEA_003372	TEA_000261	A0A4S4DC52	A0A4S4EIS5	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.441
TEA_003372	TEA_001059	A0A4S4DC52	A0A4S4EWQ7	Uncharacterized protein.	F-box domain-containing protein.	0.441
TEA_003372	TEA_004376	A0A4S4DC52	A0A4S4CWS0	Uncharacterized protein.	Uncharacterized protein.	0.820
TEA_003372	TEA_004685	A0A4S4DC52	A0A4S4F418	Uncharacterized protein.	Fe-S_biosyn domain-containing protein.	0.729
TEA_003372	TEA_005166	A0A4S4DC52	A0A4S4DUH7	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.441
TEA_003372	TEA_012439	A0A4S4DC52	A0A4S4ERD3	Uncharacterized protein.	Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.	0.465