STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_001420G-patch domain-containing protein. (340 aa)    
Predicted Functional Partners:
TEA_015598
Helicase ATP-binding domain-containing protein.
    
 0.896
TEA_020769
Uncharacterized protein.
    
 
 0.831
TEA_007044
Uncharacterized protein.
    
 
 0.828
TEA_026631
Uncharacterized protein.
   
   0.828
TEA_024378
Sas10 domain-containing protein.
    
   0.826
TEA_017722
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.826
TEA_025708
Uncharacterized protein.
    
   0.826
TEA_000566
RNA helicase.
    
 0.814
TEA_000840
Uncharacterized protein.
    
 0.814
TEA_002966
Uncharacterized protein.
    
 
 0.782
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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