STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_013761PARP catalytic domain-containing protein. (326 aa)    
Predicted Functional Partners:
TEA_020065
Hist_deacetyl domain-containing protein.
    
  0.700
TEA_000937
Pyr_redox_2 domain-containing protein.
  
 0.561
TEA_028065
Pyr_redox_2 domain-containing protein.
  
 0.561
TEA_013174
Uncharacterized protein.
  
 0.561
TEA_010470
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.530
TEA_026894
Uncharacterized protein.
    
  0.530
TEA_026885
Hist_deacetyl domain-containing protein.
    
  0.530
TEA_013727
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
  0.530
TEA_020138
Hist_deacetyl domain-containing protein.
    
  0.515
TEA_010739
Uncharacterized protein.
    
  0.515
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.