TEA_004880 protein (Camellia sinensis) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

TEA_004880

ABC transmembrane type-1 domain-containing protein. (174 aa)

Predicted Functional Partners:

TEA_019349

0.613

TEA_012290

0.595

TEA_003225

0.562

TEA_029509

0.562

TEA_008237

0.487

TEA_014746

0.487

TEA_001358

0.484

TEA_013473

0.481

TEA_002532

0.481

TEA_019033

0.481

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_001358	TEA_002532	A0A4S4DEB7	A0A4S4DJ39	GGACT domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.999
TEA_001358	TEA_004880	A0A4S4DEB7	A0A4S4D9Y6	GGACT domain-containing protein.	ABC transmembrane type-1 domain-containing protein.	0.484
TEA_002532	TEA_001358	A0A4S4DJ39	A0A4S4DEB7	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	GGACT domain-containing protein.	0.999
TEA_002532	TEA_004880	A0A4S4DJ39	A0A4S4D9Y6	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	ABC transmembrane type-1 domain-containing protein.	0.481
TEA_003225	TEA_004880	A0A4S4DUU5	A0A4S4D9Y6	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.562
TEA_003225	TEA_019349	A0A4S4DUU5	A0A4S4EF76	Uncharacterized protein.	Uncharacterized protein.	0.454
TEA_004880	TEA_001358	A0A4S4D9Y6	A0A4S4DEB7	ABC transmembrane type-1 domain-containing protein.	GGACT domain-containing protein.	0.484
TEA_004880	TEA_002532	A0A4S4D9Y6	A0A4S4DJ39	ABC transmembrane type-1 domain-containing protein.	Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.	0.481
TEA_004880	TEA_003225	A0A4S4D9Y6	A0A4S4DUU5	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.562
TEA_004880	TEA_008237	A0A4S4D9Y6	A0A4S4EC77	ABC transmembrane type-1 domain-containing protein.	Diacylglycerol kinase.	0.487
TEA_004880	TEA_012290	A0A4S4D9Y6	A0A4S4EAE2	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.595
TEA_004880	TEA_013473	A0A4S4D9Y6	A0A4S4CX08	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.481
TEA_004880	TEA_014746	A0A4S4D9Y6	A0A4V3WPT8	ABC transmembrane type-1 domain-containing protein.	Diacylglycerol kinase.	0.487
TEA_004880	TEA_019033	A0A4S4D9Y6	A0A4S4ESX2	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.481
TEA_004880	TEA_019349	A0A4S4D9Y6	A0A4S4EF76	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.613
TEA_004880	TEA_029509	A0A4S4D9Y6	A0A4S4DVW0	ABC transmembrane type-1 domain-containing protein.	Uncharacterized protein.	0.562
TEA_008237	TEA_004880	A0A4S4EC77	A0A4S4D9Y6	Diacylglycerol kinase.	ABC transmembrane type-1 domain-containing protein.	0.487
TEA_008237	TEA_012290	A0A4S4EC77	A0A4S4EAE2	Diacylglycerol kinase.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.885
TEA_008237	TEA_013473	A0A4S4EC77	A0A4S4CX08	Diacylglycerol kinase.	Uncharacterized protein.	0.900
TEA_008237	TEA_014746	A0A4S4EC77	A0A4V3WPT8	Diacylglycerol kinase.	Diacylglycerol kinase.	0.866

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Network Stats

number of nodes:

11

number of edges:

19

average node degree:

3.45

avg. local clustering coefficient:

0.852

expected number of edges:

13

PPI enrichment p-value:

0.0832

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0035601

Protein deacylation

2 of 22

2.23

1.18

0.0155

GO:0006357

Regulation of transcription by RNA polymerase II

5 of 470

1.3

1.09

0.0030

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0004407

Histone deacetylase activity

2 of 9

2.62

1.12

0.0213

GO:0000977

RNA polymerase II transcription regulatory region sequence-specific DNA binding

3 of 95

1.77

1.01

0.0213

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

3 of 233

1.38

0.8

0.0315

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:9511

Mixed, incl. Homeobox, and CCAAT-binding factor complex

3 of 27

2.31

2.01

0.00071

CL:2967

Rpd3S/Clr6-CII complex, and Sds3-like

2 of 6

2.79

1.66

0.0034

CL:9514

Mixed, incl. Homeobox, and Senescence-Associated Secretory Phenotype (SASP)

2 of 17

2.34

1.22

0.0140

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map04213

Longevity regulating pathway - multiple species

2 of 11

2.53

1.67

0.0030

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00850

Histone deacetylase domain

2 of 4

2.97

1.62

0.0040

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR003084

Histone deacetylase

2 of 2

3.27

1.59

0.0045

IPR000286

Histone deacetylase family

2 of 3

3.09

1.59

0.0045

IPR037138

Histone deacetylase domain superfamily

2 of 4

2.97

1.58

0.0045

IPR023801

Histone deacetylase domain

2 of 4

2.97

1.58

0.0045

IPR023696

Ureohydrolase domain superfamily

2 of 10

2.57

1.34

0.0098

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