TEA_019127 protein (Camellia sinensis) - STRING interaction network

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second shell of interactors

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Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

TEA_019127

Aminotran_1_2 domain-containing protein. (312 aa)

Predicted Functional Partners:

TEA_015229

0.938

TEA_005193

0.935

TEA_022838

0.934

TEA_018537

0.908

TEA_020478

0.902

TEA_007458

0.896

TEA_011221

0.895

TEA_013652

0.895

TEA_030205

0.887

TEA_017690

0.884

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_005193	TEA_011221	A0A4S4EUG2	A0A4S4DNP9	Aspartate aminotransferase.	Aspartate aminotransferase.	0.878
TEA_005193	TEA_013652	A0A4S4EUG2	A0A4V3WLL4	Aspartate aminotransferase.	Uncharacterized protein.	0.873
TEA_005193	TEA_015229	A0A4S4EUG2	A0A4S4EP80	Aspartate aminotransferase.	Aminotran_5 domain-containing protein.	0.494
TEA_005193	TEA_017690	A0A4S4EUG2	A0A4S4EAN2	Aspartate aminotransferase.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.935
TEA_005193	TEA_019127	A0A4S4EUG2	A0A4S4DA54	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.935
TEA_005193	TEA_020478	A0A4S4EUG2	A0A4S4D418	Aspartate aminotransferase.	Iso_dh domain-containing protein.	0.949
TEA_005193	TEA_022838	A0A4S4EUG2	A0A4S4E0B0	Aspartate aminotransferase.	Aspartate aminotransferase.	0.885
TEA_005193	TEA_030205	A0A4S4EUG2	A0A4S4DKZ2	Aspartate aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.936
TEA_007458	TEA_015229	A0A4S4E2A0	A0A4S4EP80	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_5 domain-containing protein.	0.958
TEA_007458	TEA_017690	A0A4S4E2A0	A0A4S4EAN2	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.530
TEA_007458	TEA_019127	A0A4S4E2A0	A0A4S4DA54	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Aminotran_1_2 domain-containing protein.	0.896
TEA_007458	TEA_030205	A0A4S4E2A0	A0A4S4DKZ2	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.736
TEA_011221	TEA_005193	A0A4S4DNP9	A0A4S4EUG2	Aspartate aminotransferase.	Aspartate aminotransferase.	0.878
TEA_011221	TEA_015229	A0A4S4DNP9	A0A4S4EP80	Aspartate aminotransferase.	Aminotran_5 domain-containing protein.	0.494
TEA_011221	TEA_017690	A0A4S4DNP9	A0A4S4EAN2	Aspartate aminotransferase.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.931
TEA_011221	TEA_019127	A0A4S4DNP9	A0A4S4DA54	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.895
TEA_011221	TEA_020478	A0A4S4DNP9	A0A4S4D418	Aspartate aminotransferase.	Iso_dh domain-containing protein.	0.943
TEA_011221	TEA_022838	A0A4S4DNP9	A0A4S4E0B0	Aspartate aminotransferase.	Aspartate aminotransferase.	0.877
TEA_011221	TEA_030205	A0A4S4DNP9	A0A4S4DKZ2	Aspartate aminotransferase.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.933
TEA_013652	TEA_005193	A0A4V3WLL4	A0A4S4EUG2	Uncharacterized protein.	Aspartate aminotransferase.	0.873

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Network Stats

number of nodes:

11

number of edges:

38

average node degree:

6.91

avg. local clustering coefficient:

0.695

expected number of edges:

11

PPI enrichment p-value:

9.53e-11

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0055085

Transmembrane transport

9 of 210

1.08

1.29

4.63e-07

GO:0006810

Transport

11 of 304

1.0

1.24

1.05e-08

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0140359

ABC-type transporter activity

3 of 23

1.56

0.69

0.0399

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005886

Plasma membrane

9 of 333

0.88

0.87

1.21e-05

GO:0016021

Integral component of membrane

7 of 569

0.54

0.34

0.0364

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2973

ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein

11 of 18

2.23

8.2

3.31e-21

CL:2974

ABC transporter type 1, transmembrane domain MetI-like, and ABC transporter, maltose/maltodextrin import, MalK-like

7 of 12

2.21

5.27

2.19e-12

CL:2997

ABC transporter type 1, transmembrane domain MetI-like, and Bacterial extracellular solute-binding protein

4 of 6

2.27

3.01

1.12e-06

CL:2975

ABC transporter type 1, transmembrane domain MetI-like, and TOBE domain

4 of 6

2.27

3.01

1.12e-06

CL:2986

ABC transporter type 1, transmembrane domain MetI-like, and ABC transporter, maltose/maltodextrin import, MalK-like

3 of 6

2.14

1.97

0.00014

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map02010

ABC transporters

11 of 106

1.46

3.01

1.47e-14

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0055052

ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

6 of 6

2.45

5.4

1.22e-11

GOCC:0043190

ATP-binding cassette (ABC) transporter complex

9 of 29

1.94

5.0

2.68e-14

GOCC:0110165

Cellular anatomical entity

11 of 1512

0.31

0.27

0.0063

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0813

Transport

9 of 77

1.51

2.81

6.08e-11

KW-1003

Cell membrane

7 of 74

1.42

2.05

1.73e-07

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00528

Binding-protein-dependent transport system inner membrane component

7 of 15

2.11

4.6

4.05e-11

PF13416

Bacterial extracellular solute-binding protein

2 of 3

2.27

0.9

0.0217

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR000515

ABC transporter type 1, transmembrane domain MetI-like

7 of 15

2.11

4.45

1.05e-10

IPR035906

MetI-like superfamily

7 of 16

2.09

4.39

1.05e-10

IPR015855

ABC transporter, maltose/maltodextrin import, MalK-like

2 of 2

2.45

0.9

0.0226

IPR008995

Molybdate/tungstate binding, C-terminal

2 of 3

2.27

0.84

0.0282

IPR006059

Bacterial extracellular solute-binding protein

2 of 3

2.27

0.84

0.0282

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