TEA_024469 protein (Camellia sinensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

TEA_024469

Uncharacterized protein. (651 aa)

Predicted Functional Partners:

TEA_001255

0.480

TEA_018170

0.474

TEA_020778

0.474

TEA_007011

0.474

TEA_007013

0.474

TEA_005945

0.474

TEA_010621

0.471

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_001255	TEA_024469	A0A4S4ESR8	A0A4S4DMM3	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	Uncharacterized protein.	0.480
TEA_005945	TEA_007011	A0A4V3WL53	A0A4S4DRX4	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.991
TEA_005945	TEA_007013	A0A4V3WL53	A0A4S4DRY0	Uncharacterized protein; Belongs to the GST superfamily.	EF-1-gamma C-terminal domain-containing protein.	0.991
TEA_005945	TEA_018170	A0A4V3WL53	A0A4S4D1Z2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.991
TEA_005945	TEA_020778	A0A4V3WL53	A0A4S4DFL8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_005945	TEA_024469	A0A4V3WL53	A0A4S4DMM3	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.474
TEA_007011	TEA_005945	A0A4S4DRX4	A0A4V3WL53	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_007011	TEA_007013	A0A4S4DRX4	A0A4S4DRY0	Uncharacterized protein.	EF-1-gamma C-terminal domain-containing protein.	0.991
TEA_007011	TEA_018170	A0A4S4DRX4	A0A4S4D1Z2	Uncharacterized protein.	Uncharacterized protein.	0.991
TEA_007011	TEA_020778	A0A4S4DRX4	A0A4S4DFL8	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_007011	TEA_024469	A0A4S4DRX4	A0A4S4DMM3	Uncharacterized protein.	Uncharacterized protein.	0.474
TEA_007013	TEA_005945	A0A4S4DRY0	A0A4V3WL53	EF-1-gamma C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_007013	TEA_007011	A0A4S4DRY0	A0A4S4DRX4	EF-1-gamma C-terminal domain-containing protein.	Uncharacterized protein.	0.991
TEA_007013	TEA_018170	A0A4S4DRY0	A0A4S4D1Z2	EF-1-gamma C-terminal domain-containing protein.	Uncharacterized protein.	0.991
TEA_007013	TEA_020778	A0A4S4DRY0	A0A4S4DFL8	EF-1-gamma C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_007013	TEA_024469	A0A4S4DRY0	A0A4S4DMM3	EF-1-gamma C-terminal domain-containing protein.	Uncharacterized protein.	0.474
TEA_010621	TEA_024469	A0A4S4D9J0	A0A4S4DMM3	NB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family.	Uncharacterized protein.	0.471
TEA_018170	TEA_005945	A0A4S4D1Z2	A0A4V3WL53	Uncharacterized protein.	Uncharacterized protein; Belongs to the GST superfamily.	0.991
TEA_018170	TEA_007011	A0A4S4D1Z2	A0A4S4DRX4	Uncharacterized protein.	Uncharacterized protein.	0.991
TEA_018170	TEA_007013	A0A4S4D1Z2	A0A4S4DRY0	Uncharacterized protein.	EF-1-gamma C-terminal domain-containing protein.	0.991

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Network Stats

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Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

11 of 188

1.3

2.17

1.56e-11

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

11 of 85

1.65

3.94

1.42e-15

GO:0019843

rRNA binding

3 of 28

1.56

0.8

0.0228

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005840

Ribosome

11 of 96

1.59

3.65

3.29e-15

GO:0044391

Ribosomal subunit

6 of 71

1.46

1.88

3.62e-06

GO:0015934

Large ribosomal subunit

4 of 40

1.53

1.38

0.00057

GO:0005761

Mitochondrial ribosome

3 of 26

1.6

1.07

0.0053

GO:0005762

Mitochondrial large ribosomal subunit

2 of 13

1.72

0.71

0.0410

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:2525

Structural constituent of ribosome

10 of 16

2.33

8.2

1.05e-19

CL:2522

Organellar ribosome, and SRP-dependent cotranslational protein targeting to membrane

11 of 34

2.04

6.77

1.05e-19

CL:2527

Mixed, incl. L28p-like, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like

5 of 5

2.53

4.62

1.01e-09

CL:2541

SRP-dependent cotranslational protein targeting to membrane

4 of 8

2.23

3.01

9.67e-07

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

11 of 93

1.61

3.81

5.20e-16

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-72766

Translation

10 of 157

1.34

2.2

1.75e-10

MAP-72706

GTP hydrolysis and joining of the 60S ribosomal subunit

6 of 62

1.52

1.95

4.37e-06

MAP-72689

Formation of a pool of free 40S subunits

6 of 65

1.5

1.92

4.37e-06

MAP-975956

Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)

6 of 67

1.49

1.9

4.37e-06

MAP-1799339

SRP-dependent cotranslational protein targeting to membrane

6 of 67

1.49

1.9

4.37e-06

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0044391

Ribosomal subunit

7 of 74

1.51

2.19

3.06e-07

GOCC:0022626

Cytosolic ribosome

5 of 54

1.5

1.68

4.13e-05

GOCC:0015934

Large ribosomal subunit

4 of 43

1.5

1.37

0.00050

GOCC:0015935

Small ribosomal subunit

3 of 30

1.53

1.03

0.0058

GOCC:0022625

Cytosolic large ribosomal subunit

3 of 31

1.52

1.02

0.0058

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

5 of 63

1.43

1.48

0.00012

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