STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_006194Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (187 aa)    
Predicted Functional Partners:
TEA_013272
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 
 0.999
TEA_002981
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
 0.999
TEA_001687
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 
 0.999
TEA_002462
Ribosomal_L16 domain-containing protein.
   
 
 0.999
TEA_024460
Ribosomal_L28e domain-containing protein.
   
 
 0.999
TEA_009183
Histone domain-containing protein.
   
 
 0.999
TEA_005938
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 
 0.999
TEA_023249
Uncharacterized protein.
   
 0.999
TEA_005747
RRM domain-containing protein.
   
 0.999
TEA_025644
Uncharacterized protein.
  
 
 0.999
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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