TEA_008476 protein (Camellia sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TEA_008476

Uncharacterized protein. (229 aa)

Predicted Functional Partners:

TEA_004159

0.927

TEA_004157

0.927

TEA_011954

0.868

TEA_026586

0.836

TEA_007465

0.836

TEA_001305

0.836

TEA_028480

0.836

TEA_011127

0.708

TEA_001164

0.651

TEA_000084

0.629

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_000084	TEA_001305	A0A4S4DFV1	A0A4S4EE14	TPR_REGION domain-containing protein.	MyTH4 domain-containing protein.	0.408
TEA_000084	TEA_004157	A0A4S4DFV1	A0A4S4E381	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.705
TEA_000084	TEA_004159	A0A4S4DFV1	A0A4S4E374	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.705
TEA_000084	TEA_007465	A0A4S4DFV1	A0A4S4E176	TPR_REGION domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.408
TEA_000084	TEA_008476	A0A4S4DFV1	A0A4S4DWN1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.629
TEA_000084	TEA_026586	A0A4S4DFV1	A0A4S4DPW1	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.408
TEA_000084	TEA_028480	A0A4S4DFV1	A0A4S4ER61	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.408
TEA_001164	TEA_008476	A0A4S4D7V7	A0A4S4DWN1	Arf-GAP domain-containing protein.	Uncharacterized protein.	0.651
TEA_001305	TEA_000084	A0A4S4EE14	A0A4S4DFV1	MyTH4 domain-containing protein.	TPR_REGION domain-containing protein.	0.408
TEA_001305	TEA_004157	A0A4S4EE14	A0A4S4E381	MyTH4 domain-containing protein.	Uncharacterized protein.	0.440
TEA_001305	TEA_004159	A0A4S4EE14	A0A4S4E374	MyTH4 domain-containing protein.	Uncharacterized protein.	0.440
TEA_001305	TEA_007465	A0A4S4EE14	A0A4S4E176	MyTH4 domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.464
TEA_001305	TEA_008476	A0A4S4EE14	A0A4S4DWN1	MyTH4 domain-containing protein.	Uncharacterized protein.	0.836
TEA_001305	TEA_011127	A0A4S4EE14	A0A4S4D8X1	MyTH4 domain-containing protein.	Uncharacterized protein.	0.600
TEA_004157	TEA_000084	A0A4S4E381	A0A4S4DFV1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.705
TEA_004157	TEA_001305	A0A4S4E381	A0A4S4EE14	Uncharacterized protein.	MyTH4 domain-containing protein.	0.440
TEA_004157	TEA_004159	A0A4S4E381	A0A4S4E374	Uncharacterized protein.	Uncharacterized protein.	0.937
TEA_004157	TEA_007465	A0A4S4E381	A0A4S4E176	Uncharacterized protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.440
TEA_004157	TEA_008476	A0A4S4E381	A0A4S4DWN1	Uncharacterized protein.	Uncharacterized protein.	0.927
TEA_004157	TEA_011127	A0A4S4E381	A0A4S4D8X1	Uncharacterized protein.	Uncharacterized protein.	0.629