STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_020929N2227 domain-containing protein. (478 aa)    
Predicted Functional Partners:
TEA_012553
M20_dimer domain-containing protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.909
NBP35
Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development.
     
 0.889
TEA_019168
CbiA domain-containing protein.
     
 0.889
TEA_020435
Uncharacterized protein.
     
 0.889
TEA_027873
Uncharacterized protein.
   
  0.886
TEA_010331
Uncharacterized protein.
     
 0.872
TEA_021031
Uncharacterized protein.
     
 0.872
TEA_019367
M20_dimer domain-containing protein.
     
 0.872
TEA_027871
Uncharacterized protein.
   
  0.830
TEA_004734
Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family.
    
   0.595
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.