STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_016786Nudix hydrolase domain-containing protein. (373 aa)    
Predicted Functional Partners:
TEA_001325
Uncharacterized protein.
  
 0.887
TEA_001328
YjeF N-terminal domain-containing protein.
  
 0.887
TEA_008160
YjeF N-terminal domain-containing protein.
  
 0.887
TEA_013352
Uncharacterized protein.
    
 0.823
TEA_013355
Uncharacterized protein.
    
 0.823
TEA_022937
Uncharacterized protein.
    
 0.823
TEA_013964
Uncharacterized protein.
    
 0.823
TEA_011196
Uncharacterized protein.
   
 
 0.752
LSM1
U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.
    
 0.743
TEA_013835
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.740
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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