STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_017487Uncharacterized protein. (199 aa)    
Predicted Functional Partners:
TEA_010401
Uncharacterized protein.
   
 
 0.740
TEA_014664
Uncharacterized protein.
   
 
 0.740
TEA_004276
Brix domain-containing protein.
   
   0.666
TEA_009578
G domain-containing protein.
   
 
 0.646
TEA_014302
CP-type G domain-containing protein.
   
 
 0.646
TEA_022948
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.628
TEA_024333
CBF domain-containing protein.
   
    0.616
TEA_020632
Nop domain-containing protein.
   
 
 0.597
TEA_025749
Nop domain-containing protein.
   
 
 0.597
TEA_023343
NOSIC domain-containing protein.
   
 
 0.597
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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