STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_029831Autophagy-related protein. (117 aa)    
Predicted Functional Partners:
TEA_029599
PB1 domain-containing protein.
   
 0.999
TEA_010586
Autophagy-related protein 3.
   
 0.986
TEA_017162
Cysteine protease.
   
 0.981
TEA_016888
Uncharacterized protein.
   
 0.961
TEA_013198
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.961
TEA_004778
Protein kinase domain-containing protein.
   
 0.938
TEA_016071
Protein kinase domain-containing protein.
   
 0.920
TEA_020188
Protein kinase domain-containing protein.
   
 0.920
TEA_010037
RING-type domain-containing protein.
   
 0.899
TEA_010047
Uncharacterized protein.
   
 0.899
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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