TEA_019031 protein (Camellia sinensis) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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Score

TEA_019031

Uncharacterized protein. (309 aa)

Predicted Functional Partners:

TEA_027537

0.716

TEA_022106

0.568

TEA_025235

0.568

TEA_019624

0.566

TEA_020925

0.549

TEA_016116

0.544

TEA_004596

0.544

TEA_022756

0.542

TEA_023396

0.542

TEA_023691

0.524

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_004596	TEA_019031	A0A4S4DHI2	A0A4S4ERZ5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.544
TEA_016116	TEA_019031	A0A4S4CZ12	A0A4S4ERZ5	Carrier domain-containing protein.	Uncharacterized protein.	0.544
TEA_019031	TEA_004596	A0A4S4ERZ5	A0A4S4DHI2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.544
TEA_019031	TEA_016116	A0A4S4ERZ5	A0A4S4CZ12	Uncharacterized protein.	Carrier domain-containing protein.	0.544
TEA_019031	TEA_019624	A0A4S4ERZ5	A0A4S4EX66	Uncharacterized protein.	Uncharacterized protein.	0.566
TEA_019031	TEA_020925	A0A4S4ERZ5	A0A4S4DXP8	Uncharacterized protein.	Uncharacterized protein.	0.549
TEA_019031	TEA_022106	A0A4S4ERZ5	A0A4S4D8U8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.568
TEA_019031	TEA_022756	A0A4S4ERZ5	A0A4S4D6K7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.542
TEA_019031	TEA_023396	A0A4S4ERZ5	A0A4S4E6Q4	Uncharacterized protein.	Uncharacterized protein.	0.542
TEA_019031	TEA_023691	A0A4S4ERZ5	A0A4S4E7H1	Uncharacterized protein.	UBX domain-containing protein.	0.524
TEA_019031	TEA_025235	A0A4S4ERZ5	A0A4S4EZZ2	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.568
TEA_019031	TEA_027537	A0A4S4ERZ5	A0A4S4EU64	Uncharacterized protein.	RRN7-type domain-containing protein.	0.716
TEA_019624	TEA_019031	A0A4S4EX66	A0A4S4ERZ5	Uncharacterized protein.	Uncharacterized protein.	0.566
TEA_019624	TEA_022106	A0A4S4EX66	A0A4S4D8U8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.639
TEA_019624	TEA_025235	A0A4S4EX66	A0A4S4EZZ2	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.639
TEA_020925	TEA_019031	A0A4S4DXP8	A0A4S4ERZ5	Uncharacterized protein.	Uncharacterized protein.	0.549
TEA_020925	TEA_022106	A0A4S4DXP8	A0A4S4D8U8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.760
TEA_020925	TEA_025235	A0A4S4DXP8	A0A4S4EZZ2	Uncharacterized protein.	Ribosomal_S27 domain-containing protein.	0.760
TEA_022106	TEA_019031	A0A4S4D8U8	A0A4S4ERZ5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.568
TEA_022106	TEA_019624	A0A4S4D8U8	A0A4S4EX66	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.639

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Network Stats

number of nodes:

11

number of edges:

30

average node degree:

5.45

avg. local clustering coefficient:

0.719

expected number of edges:

16

PPI enrichment p-value:

0.00125

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006310

DNA recombination

5 of 80

1.51

1.58

0.00021

GO:0015074

DNA integration

3 of 23

1.83

1.18

0.0074

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000150

DNA strand exchange activity

4 of 13

2.2

2.78

9.14e-06

GO:0140097

Catalytic activity, acting on DNA

5 of 129

1.3

1.23

0.00058

GO:0003677

DNA binding

5 of 353

0.87

0.51

0.0357

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7142

DNA strand exchange activity

4 of 11

2.28

3.04

3.50e-06

CL:7422

Mixed, incl. NUDIX hydrolase, and Transposase activity

3 of 7

2.35

2.27

0.00012

CL:7083

Mixed, incl. DNA metabolic process, and Transmembrane

7 of 193

1.27

1.59

3.50e-06

CL:7144

Recombinase zinc beta ribbon domain

2 of 5

2.32

1.38

0.0048

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0018995

Host cellular component

4 of 18

2.06

2.62

1.16e-05

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036162

Resolvase-like, N-terminal catalytic domain superfamily

4 of 13

2.2

2.61

2.02e-05

IPR006119

Resolvase, N-terminal catalytic domain

4 of 13

2.2

2.61

2.02e-05

IPR025827

Recombinase zinc beta ribbon domain

3 of 6

2.41

2.17

0.00020

IPR038109

DNA-binding recombinase domain superfamily

3 of 9

2.24

1.96

0.00039

IPR011109

DNA-binding recombinase domain

3 of 9

2.24

1.96

0.00039

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00857

Resolvase, N terminal domain

3 of 11

2.15

2.07

0.00021

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