TEA_007698 protein (Camellia sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TEA_007698

PNP_UDP_1 domain-containing protein. (349 aa)

Predicted Functional Partners:

TEA_004676

0.834

COQ3

0.827

TEA_010187

0.793

TEA_009364

0.766

TEA_015866

0.749

TEA_016013

0.749

TEA_013653

0.749

TEA_006383

0.749

TEA_016283

0.749

TEA_020520

0.749

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ3	TEA_007698	A0A4S4EA50	A0A4S4EX67	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	PNP_UDP_1 domain-containing protein.	0.827
COQ3	TEA_010187	A0A4S4EA50	A0A4S4DUA7	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.898
TEA_004676	TEA_007698	A0A4S4DNJ1	A0A4S4EX67	Uncharacterized protein.	PNP_UDP_1 domain-containing protein.	0.834
TEA_006383	TEA_007698	A0A4S4E191	A0A4S4EX67	Pribosyltran domain-containing protein.	PNP_UDP_1 domain-containing protein.	0.749
TEA_006383	TEA_013653	A0A4S4E191	A0A4S4DQ43	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.945
TEA_006383	TEA_016013	A0A4S4E191	A0A4S4DKV1	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.945
TEA_006383	TEA_020520	A0A4S4E191	A0A4S4EWV8	Pribosyltran domain-containing protein.	Pribosyltran domain-containing protein.	0.872
TEA_007698	COQ3	A0A4S4EX67	A0A4S4EA50	PNP_UDP_1 domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.827
TEA_007698	TEA_004676	A0A4S4EX67	A0A4S4DNJ1	PNP_UDP_1 domain-containing protein.	Uncharacterized protein.	0.834
TEA_007698	TEA_006383	A0A4S4EX67	A0A4S4E191	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_007698	TEA_009364	A0A4S4EX67	A0A4S4EEC5	PNP_UDP_1 domain-containing protein.	Uncharacterized protein.	0.766
TEA_007698	TEA_010187	A0A4S4EX67	A0A4S4DUA7	PNP_UDP_1 domain-containing protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	0.793
TEA_007698	TEA_013653	A0A4S4EX67	A0A4S4DQ43	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_007698	TEA_015866	A0A4S4EX67	A0A4S4DEP7	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_007698	TEA_016013	A0A4S4EX67	A0A4S4DKV1	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_007698	TEA_016283	A0A4S4EX67	A0A4S4EWS7	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_007698	TEA_020520	A0A4S4EX67	A0A4S4EWV8	PNP_UDP_1 domain-containing protein.	Pribosyltran domain-containing protein.	0.749
TEA_009364	TEA_007698	A0A4S4EEC5	A0A4S4EX67	Uncharacterized protein.	PNP_UDP_1 domain-containing protein.	0.766
TEA_010187	COQ3	A0A4S4DUA7	A0A4S4EA50	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.898
TEA_010187	TEA_007698	A0A4S4DUA7	A0A4S4EX67	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.	PNP_UDP_1 domain-containing protein.	0.793