TEA_012282 protein (Camellia sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TEA_012282

Uncharacterized protein. (520 aa)

Predicted Functional Partners:

TEA_002666

0.558

TEA_005014

0.558

TEA_004409

0.518

TEA_003913

0.518

TEA_022490

0.518

TEA_008073

0.518

TEA_019339

0.427

TEA_002734

0.427

TEA_004159

0.416

TEA_004157

0.416

Your Current Organism:

Camellia sinensis

NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TEA_002666	TEA_002734	A0A4S4F0R9	A0A4S4EE27	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.475
TEA_002666	TEA_003913	A0A4S4F0R9	A0A4S4E7Y3	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.664
TEA_002666	TEA_004157	A0A4S4F0R9	A0A4S4E381	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.567
TEA_002666	TEA_004159	A0A4S4F0R9	A0A4S4E374	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.463
TEA_002666	TEA_004409	A0A4S4F0R9	A0A4S4DG09	ANK_REP_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.664
TEA_002666	TEA_005014	A0A4S4F0R9	A0A4S4F291	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.542
TEA_002666	TEA_008073	A0A4S4F0R9	A0A4S4EWC4	ANK_REP_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.664
TEA_002666	TEA_012282	A0A4S4F0R9	A0A4V3WNH1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.558
TEA_002666	TEA_019339	A0A4S4F0R9	A0A4S4DYS8	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.475
TEA_002666	TEA_022490	A0A4S4F0R9	A0A4S4EPL2	ANK_REP_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.664
TEA_002734	TEA_002666	A0A4S4EE27	A0A4S4F0R9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.475
TEA_002734	TEA_004157	A0A4S4EE27	A0A4S4E381	Uncharacterized protein.	Uncharacterized protein.	0.840
TEA_002734	TEA_004159	A0A4S4EE27	A0A4S4E374	Uncharacterized protein.	Uncharacterized protein.	0.840
TEA_002734	TEA_005014	A0A4S4EE27	A0A4S4F291	Uncharacterized protein.	Uncharacterized protein.	0.475
TEA_002734	TEA_012282	A0A4S4EE27	A0A4V3WNH1	Uncharacterized protein.	Uncharacterized protein.	0.427
TEA_003913	TEA_002666	A0A4S4E7Y3	A0A4S4F0R9	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.664
TEA_003913	TEA_004157	A0A4S4E7Y3	A0A4S4E381	Uncharacterized protein.	Uncharacterized protein.	0.564
TEA_003913	TEA_004159	A0A4S4E7Y3	A0A4S4E374	Uncharacterized protein.	Uncharacterized protein.	0.564
TEA_003913	TEA_005014	A0A4S4E7Y3	A0A4S4F291	Uncharacterized protein.	Uncharacterized protein.	0.664
TEA_003913	TEA_012282	A0A4S4E7Y3	A0A4V3WNH1	Uncharacterized protein.	Uncharacterized protein.	0.518