STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEA_028996Pectate_lyase_3 domain-containing protein. (608 aa)    
Predicted Functional Partners:
TEA_027771
Pectinesterase.
     
 0.837
TEA_004440
Pectate lyase.
     
 0.830
TEA_014008
Uncharacterized protein.
     
 0.828
TEA_014019
Pectate lyase.
     
 0.818
TEA_010654
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.818
TEA_015637
Uncharacterized protein.
  
  
 
0.808
TEA_023727
Uncharacterized protein.
  
  
 
0.807
TEA_005220
Alpha-L-AF_C domain-containing protein.
     
 0.800
TEA_017747
Uncharacterized protein.
  
  
 
0.799
TEA_028847
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
     
 0.797
Your Current Organism:
Camellia sinensis
NCBI taxonomy Id: 542762
Other names: C. sinensis var. sinensis, Camellia sinensis var. sinensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.