STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD238_008469GH10 domain-containing protein. (355 aa)    
Predicted Functional Partners:
DD238_008015
Uncharacterized protein.
    
 0.696
DD238_006844
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.696
DD237_004321
Beta-Casp domain-containing protein.
    
 0.692
DD238_001822
DUF3677 domain-containing protein.
    
 0.684
DD238_000861
Beta-Casp domain-containing protein.
    
 0.682
DD238_001173
Uncharacterized protein.
    
 0.669
DD237_002701
Uncharacterized protein.
    
 0.669
DD237_007771
Uncharacterized protein.
    
  0.644
DD237_005418
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.644
DD237_006102
Uncharacterized protein.
    
  0.631
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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