STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_006888Glyco_transf_20 domain-containing protein. (1017 aa)    
Predicted Functional Partners:
DD238_006410
Trehalase.
  
 0.908
DD237_006884
Trehalase.
  
 0.908
DD237_001249
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.905
DD238_005625
CBM20 domain-containing protein.
  
  
 
0.853
DD238_004733
Glyco_transf_20 domain-containing protein.
  
  
 
0.851
DD238_001425
Uncharacterized protein.
  
  
 
0.836
DD237_001688
Glyco_transf_20 domain-containing protein.
  
  
 
0.830
DD237_000381
Glyco_transf_20 domain-containing protein.
  
  
 
0.821
DD238_008102
Glyco_transf_20 domain-containing protein.
  
  
 
0.817
DD237_002362
Uncharacterized protein.
    
 0.807
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.