STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD237_005978Uncharacterized protein. (780 aa)    
Predicted Functional Partners:
DD237_003429
Uncharacterized protein.
   
 0.853
DD237_007132
Uncharacterized protein.
   
 0.847
DD238_006837
UBX domain-containing protein.
    
 0.841
DD237_004496
Uncharacterized protein.
   
 0.827
DD237_007672
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.820
DD237_000128
TPR_REGION domain-containing protein.
    
 0.819
DD238_001488
Uncharacterized protein.
    
 0.819
DD238_003711
PseudoU_synth_1 domain-containing protein.
    
 0.819
DD238_003961
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.818
DD237_007255
Lipase_3 domain-containing protein.
   
 0.818
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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