STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD238_006989C2 NT-type domain-containing protein. (1054 aa)    
Predicted Functional Partners:
DD238_000557
Serine/threonine-protein kinase PLK.
    
 0.685
DD238_003578
Protein kinase domain-containing protein.
    
 0.685
DD237_000021
Autophagy-related protein.
    
  0.644
DD237_001784
Uncharacterized protein.
    
 
 0.605
DD238_000075
ANK_REP_REGION domain-containing protein.
    
 0.581
DD237_005560
Protein kinase domain-containing protein.
    
 0.573
DD237_001651
Protein kinase domain-containing protein.
    
 0.573
DD238_000170
Uncharacterized protein.
    
 0.553
DD238_005172
Uncharacterized protein.
    
  0.531
DD237_002594
Fibronectin type-III domain-containing protein.
    
 0.471
Your Current Organism:
Peronospora effusa
NCBI taxonomy Id: 542832
Other names: P. effusa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.